Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARFGEF1Q9Y6D6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARFGEF1Q9Y6D6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 AC020765.3-201ENST00000613051 740 ntBASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 MIR6727-201ENST00000620702 65 ntBASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ARFGEF1Q9Y6D6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.83■□□□□ 0.76
ARFGEF1Q9Y6D6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
ARFGEF1Q9Y6D6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF1Q9Y6D6 AC018470.1-201ENST00000624790 3129 ntBASIC19.83■□□□□ 0.76
ARFGEF1Q9Y6D6 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.83■□□□□ 0.76
ARFGEF1Q9Y6D6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.83■□□□□ 0.76
ARFGEF1Q9Y6D6 AP001889.1-201ENST00000525414 633 ntBASIC19.83■□□□□ 0.76
ARFGEF1Q9Y6D6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF1Q9Y6D6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF1Q9Y6D6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
ARFGEF1Q9Y6D6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARFGEF1Q9Y6D6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 AZGP1P1-201ENST00000411909 902 ntBASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 AC091804.1-201ENST00000486888 567 ntBASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 TIMM17BP1-201ENST00000545713 516 ntBASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 AL136982.4-201ENST00000437689 1740 ntBASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 KRT8P37-201ENST00000451609 1420 ntBASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARFGEF1Q9Y6D6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 MIR326-201ENST00000362220 95 ntBASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 AC016694.1-201ENST00000434179 700 ntBASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 AC005695.3-201ENST00000614522 232 ntBASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.81■□□□□ 0.76
ARFGEF1Q9Y6D6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ARFGEF1Q9Y6D6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ARFGEF1Q9Y6D6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms