Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 ABCD1P5-201ENST00000445663 754 ntBASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 TOB2P1-201ENST00000469761 992 ntBASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 TPSP2-201ENST00000561760 610 ntBASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 MIR4492-201ENST00000581627 80 ntBASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 GPAA1P2-202ENST00000606848 1787 ntBASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBE2D4Q9Y2X8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 AC023824.1-201ENST00000562945 2975 ntBASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 NCF1C-201ENST00000438382 1427 ntBASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 IGHV3-47-201ENST00000425060 335 ntBASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 TSSC2-201ENST00000450217 709 ntBASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 DUX4L26-201ENST00000489078 1255 ntBASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 AC112504.1-201ENST00000623415 1841 ntBASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.55□□□□□ -0.56
UBE2D4Q9Y2X8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms