Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 MKNK2P1-201ENST00000437526 628 ntBASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 KRT8P48-201ENST00000515599 1220 ntBASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 AC073389.1-201ENST00000595595 795 ntBASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.32■□□□□ 0.52
BLOC1S4Q9NUP1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 PRYP6-201ENST00000514804 343 ntBASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 U82695.1-201ENST00000635752 1889 ntBASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BLOC1S4Q9NUP1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.3■□□□□ 0.52
BLOC1S4Q9NUP1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms