Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 AC024267.1-201ENST00000582320 895 ntBASIC17.43■□□□□ 0.38
TLR9Q9NR96 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.42■□□□□ 0.38
TLR9Q9NR96 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
TLR9Q9NR96 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TLR9Q9NR96 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.42■□□□□ 0.38
TLR9Q9NR96 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.42■□□□□ 0.38
TLR9Q9NR96 AC079776.1-201ENST00000401540 1152 ntBASIC17.42■□□□□ 0.38
TLR9Q9NR96 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TLR9Q9NR96 AC106886.1-201ENST00000568660 600 ntBASIC17.42■□□□□ 0.38
TLR9Q9NR96 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.42■□□□□ 0.38
TLR9Q9NR96 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.42■□□□□ 0.38
TLR9Q9NR96 MIR6805-201ENST00000615055 62 ntBASIC17.42■□□□□ 0.38
TLR9Q9NR96 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.42■□□□□ 0.38
TLR9Q9NR96 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.42■□□□□ 0.38
TLR9Q9NR96 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.42■□□□□ 0.38
TLR9Q9NR96 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TLR9Q9NR96 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 MIR1909-201ENST00000411312 80 ntBASIC17.41■□□□□ 0.38
TLR9Q9NR96 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 AC026979.3-201ENST00000607315 403 ntBASIC17.41■□□□□ 0.38
TLR9Q9NR96 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TLR9Q9NR96 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TLR9Q9NR96 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 SNX33P1-201ENST00000592116 1762 ntBASIC17.4■□□□□ 0.38
TLR9Q9NR96 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 AL645608.8-201ENST00000606034 2086 ntBASIC17.4■□□□□ 0.38
TLR9Q9NR96 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TLR9Q9NR96 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.4■□□□□ 0.38
TLR9Q9NR96 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms