Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 YBX1P2-201ENST00000489612 999 ntBASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 VENTXP5-201ENST00000523979 775 ntBASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 RNF126P1-202ENST00000569893 925 ntBASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 AC139887.4-201ENST00000607877 719 ntBASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 AC073912.3-201ENST00000624414 853 ntBASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 AC022532.1-201ENST00000624563 1728 ntBASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 AC073347.1-201ENST00000421633 2643 ntBASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 AC010491.1-201ENST00000563101 2797 ntBASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
SND1-IT1Q9HBX3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 AL353593.2-201ENST00000602529 1483 ntBASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 BX664615.1-201ENST00000443558 458 ntBASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 AL138831.2-201ENST00000606564 490 ntBASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SND1-IT1Q9HBX3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms