Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTFDC1Q9BY42 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 AP002490.2-201ENST00000524791 560 ntBASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 RARRES2P5-201ENST00000564013 466 ntBASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 AC008735.3-201ENST00000596646 500 ntBASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 MIR8072-201ENST00000614241 80 ntBASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 MIR6775-201ENST00000617557 69 ntBASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTFDC1Q9BY42 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 AL031731.1-201ENST00000642131 2094 ntBASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 FO393414.2-201ENST00000405153 598 ntBASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 RPSAP52-203ENST00000622976 1023 ntBASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTFDC1Q9BY42 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 CDC14C-201ENST00000428251 1719 ntBASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 AC015936.2-201ENST00000593177 259 ntBASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 AL033527.5-201ENST00000641382 801 ntBASIC19.83■□□□□ 0.77
RTFDC1Q9BY42 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms