Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC211476.1-201ENST00000503899 468 ntBASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 AC079781.4-201ENST00000641908 219 ntBASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 AC004967.1-201ENST00000453589 447 ntBASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 ALG1L5P-201ENST00000482043 771 ntBASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 C20orf181-201ENST00000623918 480 ntBASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.93□□□□□ -0.18
PCGF1Q9BSM1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 AC060834.1-201ENST00000443027 2032 ntBASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 HTR5BP-201ENST00000430851 1154 ntBASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 ACTL9-202ENST00000612068 1252 ntBASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 AC134684.3-201ENST00000641758 218 ntBASIC13.92□□□□□ -0.18
PCGF1Q9BSM1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms