Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC092902.6-201ENST00000641783 218 ntBASIC15.1■□□□□ 0.01
NPAS1Q99742 AL139011.1-202ENST00000642063 584 ntBASIC15.1■□□□□ 0.01
NPAS1Q99742 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS1Q99742 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS1Q99742 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS1Q99742 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS1Q99742 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPAS1Q99742 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS1Q99742 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS1Q99742 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS1Q99742 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS1Q99742 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NPAS1Q99742 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS1Q99742 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS1Q99742 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS1Q99742 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS1Q99742 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS1Q99742 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS1Q99742 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS1Q99742 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NPAS1Q99742 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS1Q99742 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS1Q99742 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS1Q99742 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
NPAS1Q99742 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS1Q99742 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
NPAS1Q99742 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.09■□□□□ 0.01
NPAS1Q99742 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS1Q99742 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS1Q99742 AC023511.2-201ENST00000618803 211 ntBASIC15.09■□□□□ 0.01
NPAS1Q99742 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS1Q99742 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS1Q99742 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NPAS1Q99742 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS1Q99742 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS1Q99742 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NPAS1Q99742 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NPAS1Q99742 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS1Q99742 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NPAS1Q99742 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS1Q99742 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.09■□□□□ 0.01
NPAS1Q99742 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.08■□□□□ 0.01
NPAS1Q99742 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.08■□□□□ 0.01
NPAS1Q99742 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
NPAS1Q99742 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NPAS1Q99742 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NPAS1Q99742 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
NPAS1Q99742 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NPAS1Q99742 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.08■□□□□ 0.01
NPAS1Q99742 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NPAS1Q99742 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 AC092364.2-201ENST00000596710 2692 ntBASIC15.08■□□□□ 0
NPAS1Q99742 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.08■□□□□ 0
NPAS1Q99742 RPSAP43-201ENST00000402237 625 ntBASIC15.08■□□□□ 0
NPAS1Q99742 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 AC092474.2-201ENST00000424288 719 ntBASIC15.08■□□□□ 0
NPAS1Q99742 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.08■□□□□ 0
NPAS1Q99742 GPX1P2-201ENST00000429271 606 ntBASIC15.08■□□□□ 0
NPAS1Q99742 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.08■□□□□ 0
NPAS1Q99742 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.08■□□□□ 0
NPAS1Q99742 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.08■□□□□ 0
NPAS1Q99742 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.08■□□□□ 0
NPAS1Q99742 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.08■□□□□ 0
NPAS1Q99742 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.08■□□□□ 0
NPAS1Q99742 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.08■□□□□ 0
NPAS1Q99742 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 AC055717.3-201ENST00000622967 595 ntBASIC15.08■□□□□ 0
NPAS1Q99742 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.08■□□□□ 0
NPAS1Q99742 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
NPAS1Q99742 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NPAS1Q99742 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.08■□□□□ 0
NPAS1Q99742 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NPAS1Q99742 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.08■□□□□ 0
NPAS1Q99742 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.08■□□□□ 0
NPAS1Q99742 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms