Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCL13Q99616 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 KRT18P13-201ENST00000400056 1290 ntBASIC13.86□□□□□ -0.19
CCL13Q99616 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL13Q99616 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 UPF3AP3-201ENST00000420996 769 ntBASIC13.86□□□□□ -0.19
CCL13Q99616 GPX1P2-201ENST00000429271 606 ntBASIC13.86□□□□□ -0.19
CCL13Q99616 AL671277.1-201ENST00000429656 993 ntBASIC13.86□□□□□ -0.19
CCL13Q99616 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL13Q99616 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCL13Q99616 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL13Q99616 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
CCL13Q99616 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL13Q99616 AC099522.2-201ENST00000607001 744 ntBASIC13.86□□□□□ -0.19
CCL13Q99616 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL13Q99616 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CCL13Q99616 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCL13Q99616 AC099398.1-201ENST00000567919 2776 ntBASIC13.86□□□□□ -0.19
CCL13Q99616 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL13Q99616 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
CCL13Q99616 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL13Q99616 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL13Q99616 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL13Q99616 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL13Q99616 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL13Q99616 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCL13Q99616 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL13Q99616 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL13Q99616 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.85□□□□□ -0.19
CCL13Q99616 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL13Q99616 RPSAP43-201ENST00000402237 625 ntBASIC13.85□□□□□ -0.19
CCL13Q99616 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL13Q99616 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL13Q99616 CEND1P1-201ENST00000451006 455 ntBASIC13.85□□□□□ -0.19
CCL13Q99616 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL13Q99616 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.85□□□□□ -0.19
CCL13Q99616 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.85□□□□□ -0.19
CCL13Q99616 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL13Q99616 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCL13Q99616 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CCL13Q99616 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CCL13Q99616 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 GGT3P-204ENST00000453783 1664 ntBASIC13.85□□□□□ -0.19
CCL13Q99616 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL13Q99616 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCL13Q99616 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
CCL13Q99616 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CCL13Q99616 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCL13Q99616 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL13Q99616 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL13Q99616 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCL13Q99616 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL13Q99616 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms