Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AL662844.4-201ENST00000606367 2838 ntBASIC13.72□□□□□ -0.21
GAFA1Q96PS6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AC093724.1-201ENST00000448659 1027 ntBASIC13.72□□□□□ -0.21
GAFA1Q96PS6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AC243562.1-201ENST00000560672 389 ntBASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AL138918.1-201ENST00000568306 659 ntBASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AC092364.2-201ENST00000596710 2692 ntBASIC13.72□□□□□ -0.21
GAFA1Q96PS6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 PCDHB19P-201ENST00000570871 2371 ntBASIC13.72□□□□□ -0.21
GAFA1Q96PS6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
GAFA1Q96PS6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 AC124067.4-201ENST00000519691 2379 ntBASIC13.71□□□□□ -0.21
GAFA1Q96PS6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 SPCS2P4-201ENST00000436160 681 ntBASIC13.71□□□□□ -0.21
GAFA1Q96PS6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 AC079140.1-201ENST00000508039 487 ntBASIC13.71□□□□□ -0.21
GAFA1Q96PS6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
GAFA1Q96PS6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms