Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 AL139011.1-202ENST00000642063 584 ntBASIC16.54■□□□□ 0.24
SIPA1Q96FS4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 AL023806.1-201ENST00000603994 1649 ntBASIC16.54■□□□□ 0.24
SIPA1Q96FS4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIPA1Q96FS4 AC141586.5-201ENST00000624546 2050 ntBASIC16.54■□□□□ 0.24
SIPA1Q96FS4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 PIN1P1-201ENST00000412108 996 ntBASIC16.53■□□□□ 0.24
SIPA1Q96FS4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 AC105021.1-202ENST00000570572 669 ntBASIC16.53■□□□□ 0.24
SIPA1Q96FS4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 AC004233.3-201ENST00000607794 1269 ntBASIC16.53■□□□□ 0.24
SIPA1Q96FS4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SIPA1Q96FS4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 AC139713.2-201ENST00000641328 2723 ntBASIC16.52■□□□□ 0.24
SIPA1Q96FS4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms