Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
USP13Q92995 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
USP13Q92995 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.32■□□□□ 0.36
USP13Q92995 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.32■□□□□ 0.36
USP13Q92995 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 SPDYE7P-202ENST00000420373 878 ntBASIC17.32■□□□□ 0.36
USP13Q92995 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.32■□□□□ 0.36
USP13Q92995 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.32■□□□□ 0.36
USP13Q92995 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
USP13Q92995 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.32■□□□□ 0.36
USP13Q92995 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.32■□□□□ 0.36
USP13Q92995 MIR4745-201ENST00000577608 62 ntBASIC17.32■□□□□ 0.36
USP13Q92995 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 AC021097.1-201ENST00000607902 574 ntBASIC17.32■□□□□ 0.36
USP13Q92995 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.32■□□□□ 0.36
USP13Q92995 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
USP13Q92995 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP13Q92995 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
USP13Q92995 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.31■□□□□ 0.36
USP13Q92995 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
USP13Q92995 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 FO538757.1-201ENST00000623083 1397 ntBASIC17.31■□□□□ 0.36
USP13Q92995 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
USP13Q92995 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.31■□□□□ 0.36
USP13Q92995 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
USP13Q92995 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.31■□□□□ 0.36
USP13Q92995 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.31■□□□□ 0.36
USP13Q92995 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.31■□□□□ 0.36
USP13Q92995 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.31■□□□□ 0.36
USP13Q92995 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.31■□□□□ 0.36
USP13Q92995 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.31■□□□□ 0.36
USP13Q92995 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.31■□□□□ 0.36
USP13Q92995 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
USP13Q92995 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.31■□□□□ 0.36
USP13Q92995 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.31■□□□□ 0.36
USP13Q92995 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.31■□□□□ 0.36
USP13Q92995 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.31■□□□□ 0.36
USP13Q92995 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.31■□□□□ 0.36
USP13Q92995 AC140878.1-201ENST00000565277 250 ntBASIC17.31■□□□□ 0.36
USP13Q92995 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.31■□□□□ 0.36
USP13Q92995 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.31■□□□□ 0.36
USP13Q92995 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.31■□□□□ 0.36
USP13Q92995 MIR6080-201ENST00000617359 66 ntBASIC17.31■□□□□ 0.36
USP13Q92995 AJ011932.1-201ENST00000621707 465 ntBASIC17.31■□□□□ 0.36
USP13Q92995 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.31■□□□□ 0.36
USP13Q92995 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.31■□□□□ 0.36
USP13Q92995 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 AC092053.1-201ENST00000605787 1936 ntBASIC17.31■□□□□ 0.36
USP13Q92995 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
USP13Q92995 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP13Q92995 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.31■□□□□ 0.36
USP13Q92995 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
USP13Q92995 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.3■□□□□ 0.36
USP13Q92995 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
USP13Q92995 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
USP13Q92995 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.3■□□□□ 0.36
USP13Q92995 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.3■□□□□ 0.36
USP13Q92995 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.3■□□□□ 0.36
USP13Q92995 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP13Q92995 BASP1P1-201ENST00000430708 665 ntBASIC17.3■□□□□ 0.36
USP13Q92995 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms