Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 AL513523.2-202ENST00000427283 2040 ntBASIC16.79■□□□□ 0.28
PTCD2Q8WV60 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 MCCD1P2-201ENST00000423228 335 ntBASIC16.79■□□□□ 0.28
PTCD2Q8WV60 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 AL078644.1-201ENST00000609881 752 ntBASIC16.79■□□□□ 0.28
PTCD2Q8WV60 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 GPAA1P2-202ENST00000606848 1787 ntBASIC16.79■□□□□ 0.28
PTCD2Q8WV60 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 AC026691.1-201ENST00000602502 2017 ntBASIC16.79■□□□□ 0.28
PTCD2Q8WV60 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.79■□□□□ 0.28
PTCD2Q8WV60 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 AC092919.2-201ENST00000623631 1645 ntBASIC16.78■□□□□ 0.28
PTCD2Q8WV60 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 PDPK2P-202ENST00000562415 1191 ntBASIC16.78■□□□□ 0.28
PTCD2Q8WV60 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.78■□□□□ 0.28
PTCD2Q8WV60 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 AC009452.1-201ENST00000640823 606 ntBASIC16.78■□□□□ 0.28
PTCD2Q8WV60 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 LINC01144-201ENST00000626198 1710 ntBASIC16.78■□□□□ 0.28
PTCD2Q8WV60 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTCD2Q8WV60 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms