Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 AL079307.3-201ENST00000556114 283 ntBASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNPOQ8N3V7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 U91328.1-201ENST00000437528 223 ntBASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 AC135586.1-201ENST00000539323 574 ntBASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 AL133215.2-201ENST00000609242 977 ntBASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPOQ8N3V7 AC106820.2-201ENST00000563775 3264 ntBASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 AC011495.1-201ENST00000498085 584 ntBASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 RNA5SP410-201ENST00000516285 106 ntBASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 AC124947.2-201ENST00000547118 1133 ntBASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 AC013467.2-201ENST00000605472 835 ntBASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 AC004840.1-201ENST00000636359 365 ntBASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms