Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
COL27A1Q8IZC6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 INTS4P2-202ENST00000614726 2019 ntBASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 AC068587.3-201ENST00000526613 355 ntBASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 AL049840.4-201ENST00000602422 811 ntBASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
COL27A1Q8IZC6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 AL592424.1-201ENST00000563624 1536 ntBASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 CTBP2P5-201ENST00000454986 1264 ntBASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 ZNF767P-206ENST00000513792 565 ntBASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 HNRNPUP1-201ENST00000554987 333 ntBASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 AL133373.2-201ENST00000623187 2828 ntBASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 PCDHB18P-201ENST00000524813 2368 ntBASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 LETM1P2-201ENST00000597330 2178 ntBASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
COL27A1Q8IZC6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.25■□□□□ 0.03
COL27A1Q8IZC6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms