Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 GGT3P-204ENST00000453783 1664 ntBASIC16.94■□□□□ 0.3
CASC4Q6P4E1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 AC007326.2-201ENST00000624224 7579 ntBASIC16.94■□□□□ 0.3
CASC4Q6P4E1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASC4Q6P4E1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 AC132872.4-202ENST00000622924 2756 ntBASIC16.93■□□□□ 0.3
CASC4Q6P4E1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 RPS2P1-201ENST00000434010 821 ntBASIC16.93■□□□□ 0.3
CASC4Q6P4E1 SLC25A6P2-201ENST00000497974 877 ntBASIC16.93■□□□□ 0.3
CASC4Q6P4E1 AC073648.2-201ENST00000510116 352 ntBASIC16.93■□□□□ 0.3
CASC4Q6P4E1 OR7E14P-202ENST00000530490 1290 ntBASIC16.93■□□□□ 0.3
CASC4Q6P4E1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 AC091167.2-201ENST00000579581 588 ntBASIC16.93■□□□□ 0.3
CASC4Q6P4E1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 REXO1L3P-201ENST00000622202 1288 ntBASIC16.93■□□□□ 0.3
CASC4Q6P4E1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 AL512652.2-201ENST00000625156 1716 ntBASIC16.93■□□□□ 0.3
CASC4Q6P4E1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.93■□□□□ 0.3
CASC4Q6P4E1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 SNX33P1-201ENST00000592116 1762 ntBASIC16.92■□□□□ 0.3
CASC4Q6P4E1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 RPS15P9-201ENST00000494093 319 ntBASIC16.92■□□□□ 0.3
CASC4Q6P4E1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 MIR4492-201ENST00000581627 80 ntBASIC16.92■□□□□ 0.3
CASC4Q6P4E1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 KRT8P39-201ENST00000396270 1433 ntBASIC16.92■□□□□ 0.3
CASC4Q6P4E1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 AL031731.1-201ENST00000642131 2094 ntBASIC16.92■□□□□ 0.3
CASC4Q6P4E1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms