Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 AC099336.1-201ENST00000417053 1171 ntBASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 PACS1-203ENST00000524815 628 ntTSL 4 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 TECR-220ENST00000600083 1204 ntTSL 2 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 ABBA01031660.1-201ENST00000635219 756 ntBASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 DEK-201ENST00000244776 1441 ntTSL 2 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
CDC42BPAQ5VT25 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 AC068587.3-201ENST00000526613 355 ntBASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 USB1-203ENST00000539737 1212 ntTSL 2 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 AL133373.2-201ENST00000623187 2828 ntBASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 TOMM22P5-201ENST00000416399 439 ntBASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 HNRNPUP1-201ENST00000554987 333 ntBASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC24.52■■□□□ 1.52
CDC42BPAQ5VT25 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 MPV17-206ENST00000402722 827 ntTSL 3 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 USB1-202ENST00000423271 1217 ntTSL 2 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPAQ5VT25 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 GCK-202ENST00000345378 2421 ntTSL 2 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 PKIG-203ENST00000372887 769 ntTSL 3 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPAQ5VT25 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms