Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 MSTO2P-201ENST00000314835 1709 ntBASIC15.82■□□□□ 0.12
RIF1Q5UIP0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 FRMD8P1-201ENST00000440433 1524 ntBASIC15.82■□□□□ 0.12
RIF1Q5UIP0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 BAATP1-201ENST00000412284 1225 ntBASIC15.82■□□□□ 0.12
RIF1Q5UIP0 AC245884.6-201ENST00000515672 1067 ntBASIC15.82■□□□□ 0.12
RIF1Q5UIP0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIF1Q5UIP0 AC079336.7-201ENST00000623428 1078 ntBASIC15.82■□□□□ 0.12
RIF1Q5UIP0 AC244452.3-201ENST00000636814 210 ntBASIC15.82■□□□□ 0.12
RIF1Q5UIP0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 RN7SL555P-201ENST00000584742 339 ntBASIC15.81■□□□□ 0.12
RIF1Q5UIP0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.81■□□□□ 0.12
RIF1Q5UIP0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RIF1Q5UIP0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 AC022137.2-201ENST00000503482 481 ntBASIC15.8■□□□□ 0.12
RIF1Q5UIP0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 AL359711.2-201ENST00000563105 872 ntBASIC15.8■□□□□ 0.12
RIF1Q5UIP0 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RIF1Q5UIP0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms