Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 AC018695.7-201ENST00000624587 2492 ntBASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 YBX2P1-201ENST00000394192 760 ntBASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 AL355306.1-201ENST00000415580 579 ntBASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 AC093724.1-201ENST00000448659 1027 ntBASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 RARRES2P8-201ENST00000566335 367 ntBASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 AL391005.1-201ENST00000623953 2435 ntBASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN20Q4JDL3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 AC006449.6-201ENST00000612330 2296 ntBASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 AC073439.1-201ENST00000624121 1774 ntBASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 AC026691.1-201ENST00000602502 2017 ntBASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN20Q4JDL3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms