Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ANKRD55Q3KP44 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.8□□□□□ -0.2
ANKRD55Q3KP44 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ANKRD55Q3KP44 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ANKRD55Q3KP44 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ANKRD55Q3KP44 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 AL031133.1-201ENST00000406807 723 ntBASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 RN7SL606P-201ENST00000472779 293 ntBASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 AL031731.1-201ENST00000642131 2094 ntBASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ANKRD55Q3KP44 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 AL136038.3-201ENST00000561909 1096 ntBASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 AC023157.3-201ENST00000619086 2088 ntBASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ANKRD55Q3KP44 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.77□□□□□ -0.2
ANKRD55Q3KP44 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms