Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 AC067930.6-201ENST00000623257 4947 ntBASIC14.37□□□□□ -0.11
UBA52P62987 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.36□□□□□ -0.11
UBA52P62987 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UBA52P62987 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
UBA52P62987 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.36□□□□□ -0.11
UBA52P62987 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.36□□□□□ -0.11
UBA52P62987 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
UBA52P62987 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UBA52P62987 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 AL365209.1-201ENST00000624418 6473 ntBASIC14.36□□□□□ -0.11
UBA52P62987 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 AC092910.1-201ENST00000482027 1129 ntBASIC14.36□□□□□ -0.11
UBA52P62987 PGAM5P1-201ENST00000518923 814 ntBASIC14.36□□□□□ -0.11
UBA52P62987 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.36□□□□□ -0.11
UBA52P62987 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.36□□□□□ -0.11
UBA52P62987 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.36□□□□□ -0.11
UBA52P62987 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UBA52P62987 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBA52P62987 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.36□□□□□ -0.11
UBA52P62987 AC046185.3-201ENST00000623228 1824 ntBASIC14.36□□□□□ -0.11
UBA52P62987 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.36□□□□□ -0.11
UBA52P62987 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
UBA52P62987 LINC02012-201ENST00000608206 1725 ntBASIC14.35□□□□□ -0.11
UBA52P62987 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 REXO1L11P-201ENST00000620964 1927 ntBASIC14.35□□□□□ -0.11
UBA52P62987 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBA52P62987 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.35□□□□□ -0.11
UBA52P62987 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
UBA52P62987 AC099343.3-201ENST00000605834 2503 ntBASIC14.35□□□□□ -0.11
UBA52P62987 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
UBA52P62987 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBA52P62987 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.35□□□□□ -0.11
UBA52P62987 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.35□□□□□ -0.11
UBA52P62987 AC098831.1-202ENST00000438821 336 ntBASIC14.35□□□□□ -0.11
UBA52P62987 AL591424.1-201ENST00000442569 1213 ntBASIC14.35□□□□□ -0.11
UBA52P62987 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.35□□□□□ -0.11
UBA52P62987 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.35□□□□□ -0.11
UBA52P62987 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.35□□□□□ -0.11
UBA52P62987 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.35□□□□□ -0.11
UBA52P62987 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.35□□□□□ -0.11
UBA52P62987 AL356488.2-201ENST00000602755 427 ntBASIC14.35□□□□□ -0.11
UBA52P62987 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.35□□□□□ -0.11
UBA52P62987 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.35□□□□□ -0.11
UBA52P62987 AL139288.1-201ENST00000623748 933 ntBASIC14.35□□□□□ -0.11
UBA52P62987 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.35□□□□□ -0.11
UBA52P62987 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBA52P62987 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBA52P62987 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.35□□□□□ -0.11
UBA52P62987 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBA52P62987 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBA52P62987 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
UBA52P62987 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBA52P62987 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
UBA52P62987 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
UBA52P62987 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBA52P62987 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms