Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CNN2P3-201ENST00000450201 906 ntBASIC16.97■□□□□ 0.31
ATXN3P54252 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.97■□□□□ 0.31
ATXN3P54252 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.97■□□□□ 0.31
ATXN3P54252 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.97■□□□□ 0.31
ATXN3P54252 AC093520.2-201ENST00000561830 333 ntBASIC16.97■□□□□ 0.31
ATXN3P54252 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.97■□□□□ 0.31
ATXN3P54252 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.97■□□□□ 0.31
ATXN3P54252 AC026120.1-201ENST00000611536 926 ntBASIC16.97■□□□□ 0.31
ATXN3P54252 AL136317.3-201ENST00000618497 906 ntBASIC16.97■□□□□ 0.31
ATXN3P54252 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.97■□□□□ 0.31
ATXN3P54252 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.97■□□□□ 0.31
ATXN3P54252 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.97■□□□□ 0.31
ATXN3P54252 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ATXN3P54252 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
ATXN3P54252 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
ATXN3P54252 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.97■□□□□ 0.31
ATXN3P54252 TSPY26P-202ENST00000565928 3884 ntBASIC16.97■□□□□ 0.31
ATXN3P54252 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.97■□□□□ 0.31
ATXN3P54252 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ATXN3P54252 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ATXN3P54252 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATXN3P54252 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
ATXN3P54252 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ATXN3P54252 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.96■□□□□ 0.31
ATXN3P54252 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.96■□□□□ 0.31
ATXN3P54252 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ATXN3P54252 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.96■□□□□ 0.31
ATXN3P54252 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ATXN3P54252 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.96■□□□□ 0.31
ATXN3P54252 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ATXN3P54252 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
ATXN3P54252 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.96■□□□□ 0.31
ATXN3P54252 AL627223.1-201ENST00000416693 442 ntBASIC16.96■□□□□ 0.31
ATXN3P54252 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.96■□□□□ 0.31
ATXN3P54252 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 FAM185BP-201ENST00000443595 716 ntBASIC16.96■□□□□ 0.31
ATXN3P54252 SPDYE11-202ENST00000450699 704 ntBASIC16.96■□□□□ 0.31
ATXN3P54252 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.96■□□□□ 0.31
ATXN3P54252 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.96■□□□□ 0.31
ATXN3P54252 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.96■□□□□ 0.31
ATXN3P54252 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.96■□□□□ 0.31
ATXN3P54252 SPDYE9P-201ENST00000570642 692 ntBASIC16.96■□□□□ 0.31
ATXN3P54252 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.96■□□□□ 0.31
ATXN3P54252 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.96■□□□□ 0.31
ATXN3P54252 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
ATXN3P54252 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.96■□□□□ 0.31
ATXN3P54252 SPDYE10P-202ENST00000612005 668 ntBASIC16.96■□□□□ 0.31
ATXN3P54252 SPDYE8P-202ENST00000612377 668 ntBASIC16.96■□□□□ 0.31
ATXN3P54252 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
ATXN3P54252 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.96■□□□□ 0.31
ATXN3P54252 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATXN3P54252 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
ATXN3P54252 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATXN3P54252 AC092919.2-201ENST00000623631 1645 ntBASIC16.96■□□□□ 0.3
ATXN3P54252 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATXN3P54252 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.96■□□□□ 0.3
ATXN3P54252 AC063926.2-201ENST00000623766 1308 ntBASIC16.96■□□□□ 0.3
ATXN3P54252 AC132872.4-202ENST00000622924 2756 ntBASIC16.95■□□□□ 0.3
ATXN3P54252 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.95■□□□□ 0.3
ATXN3P54252 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.95■□□□□ 0.3
ATXN3P54252 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ATXN3P54252 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms