Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC10.55□□□□□ -0.72
UBE2AP49459 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2AP49459 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
UBE2AP49459 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
UBE2AP49459 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
UBE2AP49459 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2AP49459 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
UBE2AP49459 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC10.55□□□□□ -0.72
UBE2AP49459 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC10.55□□□□□ -0.72
UBE2AP49459 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC10.55□□□□□ -0.72
UBE2AP49459 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC10.55□□□□□ -0.72
UBE2AP49459 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC10.55□□□□□ -0.72
UBE2AP49459 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC10.55□□□□□ -0.72
UBE2AP49459 MTDHP3-201ENST00000594186 672 ntBASIC10.55□□□□□ -0.72
UBE2AP49459 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2AP49459 NID2-208ENST00000617139 3827 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2AP49459 ABBA01031661.1-201ENST00000634362 1253 ntBASIC10.55□□□□□ -0.72
UBE2AP49459 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 USP3-204ENST00000540797 5474 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
UBE2AP49459 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
UBE2AP49459 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
UBE2AP49459 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC10.55□□□□□ -0.72
UBE2AP49459 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBE2AP49459 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
UBE2AP49459 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 AL136379.1-201ENST00000623471 2642 ntBASIC10.54□□□□□ -0.72
UBE2AP49459 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 GID4-202ENST00000376345 1391 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2AP49459 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2AP49459 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2AP49459 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC10.54□□□□□ -0.72
UBE2AP49459 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2AP49459 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2AP49459 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2AP49459 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2AP49459 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2AP49459 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2AP49459 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2AP49459 AP001269.4-201ENST00000609611 512 ntBASIC10.54□□□□□ -0.72
UBE2AP49459 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
UBE2AP49459 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms