Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN3P26045 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PTPN3P26045 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTPN3P26045 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN3P26045 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN3P26045 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
PTPN3P26045 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PTPN3P26045 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
PTPN3P26045 AC092919.2-201ENST00000623631 1645 ntBASIC16.86■□□□□ 0.29
PTPN3P26045 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PTPN3P26045 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN3P26045 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN3P26045 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN3P26045 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN3P26045 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
PTPN3P26045 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN3P26045 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.86■□□□□ 0.29
PTPN3P26045 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN3P26045 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.86■□□□□ 0.29
PTPN3P26045 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 AC006449.6-201ENST00000612330 2296 ntBASIC16.86■□□□□ 0.29
PTPN3P26045 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PTPN3P26045 REXO1L8P-201ENST00000604378 1897 ntBASIC16.86■□□□□ 0.29
PTPN3P26045 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.86■□□□□ 0.29
PTPN3P26045 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 AL596087.1-201ENST00000400979 1969 ntBASIC16.86■□□□□ 0.29
PTPN3P26045 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN3P26045 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN3P26045 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN3P26045 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN3P26045 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
PTPN3P26045 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN3P26045 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN3P26045 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN3P26045 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN3P26045 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN3P26045 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN3P26045 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PTPN3P26045 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN3P26045 MED15P5-201ENST00000423150 992 ntBASIC16.85■□□□□ 0.29
PTPN3P26045 AC092474.2-201ENST00000424288 719 ntBASIC16.85■□□□□ 0.29
PTPN3P26045 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN3P26045 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PTPN3P26045 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
PTPN3P26045 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PTPN3P26045 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.85■□□□□ 0.29
PTPN3P26045 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN3P26045 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN3P26045 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.85■□□□□ 0.29
PTPN3P26045 AC027601.4-201ENST00000611259 610 ntBASIC16.85■□□□□ 0.29
PTPN3P26045 AL513190.1-201ENST00000621254 727 ntBASIC16.85■□□□□ 0.29
PTPN3P26045 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PTPN3P26045 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN3P26045 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN3P26045 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
PTPN3P26045 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN3P26045 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN3P26045 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms