Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX1P22670 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.01■□□□□ 0.47
RFX1P22670 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.01■□□□□ 0.47
RFX1P22670 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RFX1P22670 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX1P22670 AC004835.2-201ENST00000603762 682 ntBASIC18.01■□□□□ 0.47
RFX1P22670 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RFX1P22670 AC010654.1-201ENST00000615722 808 ntBASIC18.01■□□□□ 0.47
RFX1P22670 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RFX1P22670 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.01■□□□□ 0.47
RFX1P22670 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.01■□□□□ 0.47
RFX1P22670 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.01■□□□□ 0.47
RFX1P22670 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFX1P22670 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.01■□□□□ 0.47
RFX1P22670 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18■□□□□ 0.47
RFX1P22670 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18■□□□□ 0.47
RFX1P22670 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18■□□□□ 0.47
RFX1P22670 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18■□□□□ 0.47
RFX1P22670 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18■□□□□ 0.47
RFX1P22670 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RFX1P22670 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RFX1P22670 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18■□□□□ 0.47
RFX1P22670 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 CDK2AP2P3-201ENST00000422476 372 ntBASIC18■□□□□ 0.47
RFX1P22670 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18■□□□□ 0.47
RFX1P22670 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18■□□□□ 0.47
RFX1P22670 BCRP1-201ENST00000444246 691 ntBASIC18■□□□□ 0.47
RFX1P22670 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 AC025678.2-201ENST00000562061 970 ntBASIC18■□□□□ 0.47
RFX1P22670 PDPK2P-202ENST00000562415 1191 ntBASIC18■□□□□ 0.47
RFX1P22670 AL031432.2-201ENST00000566714 459 ntBASIC18■□□□□ 0.47
RFX1P22670 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18■□□□□ 0.47
RFX1P22670 AL928711.1-201ENST00000570165 459 ntBASIC18■□□□□ 0.47
RFX1P22670 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18■□□□□ 0.47
RFX1P22670 AC004877.2-201ENST00000623941 599 ntBASIC18■□□□□ 0.47
RFX1P22670 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RFX1P22670 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18■□□□□ 0.47
RFX1P22670 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18■□□□□ 0.47
RFX1P22670 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18■□□□□ 0.47
RFX1P22670 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18■□□□□ 0.47
RFX1P22670 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18■□□□□ 0.47
RFX1P22670 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18■□□□□ 0.47
RFX1P22670 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFX1P22670 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
RFX1P22670 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.99■□□□□ 0.47
RFX1P22670 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RFX1P22670 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RFX1P22670 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
RFX1P22670 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.99■□□□□ 0.47
RFX1P22670 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RFX1P22670 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RFX1P22670 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
RFX1P22670 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.99■□□□□ 0.47
RFX1P22670 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.99■□□□□ 0.47
RFX1P22670 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.99■□□□□ 0.47
RFX1P22670 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.99■□□□□ 0.47
RFX1P22670 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.99■□□□□ 0.47
RFX1P22670 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.99■□□□□ 0.47
RFX1P22670 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.99■□□□□ 0.47
RFX1P22670 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.99■□□□□ 0.47
RFX1P22670 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms