Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.05□□□□□ -0.16
USF1P22415 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.05□□□□□ -0.16
USF1P22415 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.05□□□□□ -0.16
USF1P22415 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
USF1P22415 AC109635.5-201ENST00000533593 962 ntBASIC14.05□□□□□ -0.16
USF1P22415 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
USF1P22415 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.05□□□□□ -0.16
USF1P22415 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.05□□□□□ -0.16
USF1P22415 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.05□□□□□ -0.16
USF1P22415 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.05□□□□□ -0.16
USF1P22415 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.05□□□□□ -0.16
USF1P22415 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
USF1P22415 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
USF1P22415 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
USF1P22415 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
USF1P22415 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
USF1P22415 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
USF1P22415 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
USF1P22415 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.05□□□□□ -0.16
USF1P22415 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
USF1P22415 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.05□□□□□ -0.16
USF1P22415 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.05□□□□□ -0.16
USF1P22415 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
USF1P22415 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
USF1P22415 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
USF1P22415 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
USF1P22415 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.04□□□□□ -0.16
USF1P22415 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
USF1P22415 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.04□□□□□ -0.16
USF1P22415 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.04□□□□□ -0.16
USF1P22415 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
USF1P22415 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.04□□□□□ -0.16
USF1P22415 AC126755.1-201ENST00000525846 6405 ntBASIC14.04□□□□□ -0.16
USF1P22415 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.04□□□□□ -0.16
USF1P22415 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.04□□□□□ -0.16
USF1P22415 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.04□□□□□ -0.16
USF1P22415 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.04□□□□□ -0.16
USF1P22415 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.04□□□□□ -0.16
USF1P22415 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.04□□□□□ -0.16
USF1P22415 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.04□□□□□ -0.16
USF1P22415 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.04□□□□□ -0.16
USF1P22415 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.04□□□□□ -0.16
USF1P22415 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.04□□□□□ -0.16
USF1P22415 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.04□□□□□ -0.16
USF1P22415 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
USF1P22415 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
USF1P22415 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
USF1P22415 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
USF1P22415 AC116353.5-201ENST00000638148 1699 ntBASIC14.04□□□□□ -0.16
USF1P22415 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USF1P22415 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
USF1P22415 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.04□□□□□ -0.16
USF1P22415 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USF1P22415 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.03□□□□□ -0.16
USF1P22415 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
USF1P22415 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USF1P22415 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
USF1P22415 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.03□□□□□ -0.16
USF1P22415 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.03□□□□□ -0.16
USF1P22415 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
USF1P22415 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USF1P22415 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.03□□□□□ -0.16
USF1P22415 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USF1P22415 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
USF1P22415 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USF1P22415 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USF1P22415 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USF1P22415 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.03□□□□□ -0.16
USF1P22415 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USF1P22415 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.03□□□□□ -0.16
USF1P22415 GPS2P2-201ENST00000430745 888 ntBASIC14.03□□□□□ -0.16
USF1P22415 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.03□□□□□ -0.16
USF1P22415 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.03□□□□□ -0.16
USF1P22415 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.03□□□□□ -0.16
USF1P22415 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.03□□□□□ -0.16
USF1P22415 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.03□□□□□ -0.16
USF1P22415 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USF1P22415 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.03□□□□□ -0.16
USF1P22415 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.03□□□□□ -0.16
USF1P22415 AC140878.1-201ENST00000565277 250 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms