Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT4P19013 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT4P19013 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT4P19013 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT4P19013 TPSP2-201ENST00000561760 610 ntBASIC16.66■□□□□ 0.26
KRT4P19013 MIR4492-201ENST00000581627 80 ntBASIC16.66■□□□□ 0.26
KRT4P19013 MPDU1-223ENST00000582151 728 ntBASIC16.66■□□□□ 0.26
KRT4P19013 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT4P19013 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 PCGF3-213ENST00000620529 1899 ntBASIC16.66■□□□□ 0.26
KRT4P19013 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT4P19013 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT4P19013 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
KRT4P19013 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT4P19013 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KRT4P19013 AP002414.2-201ENST00000591780 3365 ntBASIC16.65■□□□□ 0.26
KRT4P19013 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT4P19013 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
KRT4P19013 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT4P19013 TSSC2-201ENST00000450217 709 ntBASIC16.65■□□□□ 0.26
KRT4P19013 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
KRT4P19013 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.65■□□□□ 0.26
KRT4P19013 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT4P19013 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.65■□□□□ 0.26
KRT4P19013 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
KRT4P19013 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KRT4P19013 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KRT4P19013 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KRT4P19013 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT4P19013 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 AC005332.1-201ENST00000577698 1310 ntBASIC16.65■□□□□ 0.26
KRT4P19013 AC013268.4-201ENST00000637413 2228 ntBASIC16.65■□□□□ 0.26
KRT4P19013 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
KRT4P19013 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.65■□□□□ 0.26
KRT4P19013 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT4P19013 AC022532.1-201ENST00000624563 1728 ntBASIC16.65■□□□□ 0.26
KRT4P19013 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.65■□□□□ 0.26
KRT4P19013 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT4P19013 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
KRT4P19013 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
KRT4P19013 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
KRT4P19013 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.64■□□□□ 0.26
KRT4P19013 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
KRT4P19013 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
KRT4P19013 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT4P19013 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 GPAA1P2-202ENST00000606848 1787 ntBASIC16.64■□□□□ 0.25
KRT4P19013 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
KRT4P19013 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT4P19013 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT4P19013 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 POM121L3P-201ENST00000419331 1163 ntBASIC16.64■□□□□ 0.25
KRT4P19013 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT4P19013 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 POU5F1P6-201ENST00000466990 990 ntBASIC16.64■□□□□ 0.25
KRT4P19013 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT4P19013 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.64■□□□□ 0.25
KRT4P19013 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT4P19013 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
KRT4P19013 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KRT4P19013 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT4P19013 LINC01144-201ENST00000626198 1710 ntBASIC16.64■□□□□ 0.25
KRT4P19013 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms