Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
VCLP18206 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.7■□□□□ 0.26
VCLP18206 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.7■□□□□ 0.26
VCLP18206 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VCLP18206 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
VCLP18206 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 AC079328.2-201ENST00000561241 3354 ntBASIC16.69■□□□□ 0.26
VCLP18206 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 AC002310.6-201ENST00000624451 1377 ntBASIC16.69■□□□□ 0.26
VCLP18206 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VCLP18206 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.69■□□□□ 0.26
VCLP18206 SLC25A6P2-201ENST00000497974 877 ntBASIC16.69■□□□□ 0.26
VCLP18206 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 OR7E47P-204ENST00000575924 449 ntBASIC16.69■□□□□ 0.26
VCLP18206 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.69■□□□□ 0.26
VCLP18206 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
VCLP18206 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.69■□□□□ 0.26
VCLP18206 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.69■□□□□ 0.26
VCLP18206 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
VCLP18206 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
VCLP18206 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
VCLP18206 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VCLP18206 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.69■□□□□ 0.26
VCLP18206 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.68■□□□□ 0.26
VCLP18206 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VCLP18206 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.68■□□□□ 0.26
VCLP18206 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
VCLP18206 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VCLP18206 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.68■□□□□ 0.26
VCLP18206 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VCLP18206 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VCLP18206 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VCLP18206 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VCLP18206 FAM185BP-201ENST00000443595 716 ntBASIC16.68■□□□□ 0.26
VCLP18206 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.68■□□□□ 0.26
VCLP18206 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.68■□□□□ 0.26
VCLP18206 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.68■□□□□ 0.26
VCLP18206 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
VCLP18206 AC005412.3-201ENST00000580309 715 ntBASIC16.68■□□□□ 0.26
VCLP18206 AC023141.13-201ENST00000604991 943 ntBASIC16.68■□□□□ 0.26
VCLP18206 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.68■□□□□ 0.26
VCLP18206 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VCLP18206 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.68■□□□□ 0.26
VCLP18206 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
VCLP18206 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.68■□□□□ 0.26
VCLP18206 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.68■□□□□ 0.26
VCLP18206 TSPY26P-202ENST00000565928 3884 ntBASIC16.68■□□□□ 0.26
VCLP18206 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VCLP18206 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VCLP18206 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VCLP18206 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.68■□□□□ 0.26
VCLP18206 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.67■□□□□ 0.26
VCLP18206 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCLP18206 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VCLP18206 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
VCLP18206 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
VCLP18206 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
VCLP18206 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
VCLP18206 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCLP18206 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCLP18206 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCLP18206 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.67■□□□□ 0.26
VCLP18206 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VCLP18206 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCLP18206 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.67■□□□□ 0.26
VCLP18206 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.67■□□□□ 0.26
VCLP18206 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCLP18206 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VCLP18206 IGLL3P-201ENST00000412472 434 ntBASIC16.67■□□□□ 0.26
VCLP18206 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.67■□□□□ 0.26
VCLP18206 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
VCLP18206 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.67■□□□□ 0.26
VCLP18206 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
VCLP18206 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms