Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 AC010491.1-201ENST00000563101 2797 ntBASIC16.07■□□□□ 0.16
LINGO3P0C6S8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 FAM220CP-201ENST00000395253 831 ntBASIC16.07■□□□□ 0.16
LINGO3P0C6S8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 AC122714.2-201ENST00000502787 707 ntBASIC16.07■□□□□ 0.16
LINGO3P0C6S8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 AC011467.2-201ENST00000598425 242 ntBASIC16.07■□□□□ 0.16
LINGO3P0C6S8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 TP73-AS1-210ENST00000637775 1455 ntBASIC16.07■□□□□ 0.16
LINGO3P0C6S8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 AL603832.2-201ENST00000566195 2125 ntBASIC16.07■□□□□ 0.16
LINGO3P0C6S8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINGO3P0C6S8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 MYCLP1-201ENST00000372451 1075 ntBASIC16.06■□□□□ 0.16
LINGO3P0C6S8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 POM121L3P-201ENST00000419331 1163 ntBASIC16.06■□□□□ 0.16
LINGO3P0C6S8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 AC103564.2-201ENST00000432853 1299 ntBASIC16.06■□□□□ 0.16
LINGO3P0C6S8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 MIR3652-201ENST00000579335 131 ntBASIC16.06■□□□□ 0.16
LINGO3P0C6S8 AC099336.1-202ENST00000602961 463 ntBASIC16.06■□□□□ 0.16
LINGO3P0C6S8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINGO3P0C6S8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms