Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40ALP0C0E4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40ALP0C0E4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40ALP0C0E4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RAB40ALP0C0E4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40ALP0C0E4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40ALP0C0E4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40ALP0C0E4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.09
RAB40ALP0C0E4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 IGHV3-42-201ENST00000520410 361 ntBASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 RARRES2P9-201ENST00000565168 469 ntBASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 AC138761.1-201ENST00000584393 385 ntBASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 AC018529.1-201ENST00000613063 361 ntBASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40ALP0C0E4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 AC097493.3-201ENST00000509725 367 ntBASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 PRYP6-201ENST00000514804 343 ntBASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 MIR4453-201ENST00000584019 89 ntBASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
RAB40ALP0C0E4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms