Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.53■□□□□ 0.56
HOXC6P09630 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.53■□□□□ 0.56
HOXC6P09630 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.53■□□□□ 0.56
HOXC6P09630 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.53■□□□□ 0.56
HOXC6P09630 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
HOXC6P09630 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HOXC6P09630 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC6P09630 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC6P09630 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC6P09630 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.52■□□□□ 0.56
HOXC6P09630 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC6P09630 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC6P09630 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC6P09630 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC6P09630 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.52■□□□□ 0.56
HOXC6P09630 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC6P09630 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
HOXC6P09630 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HOXC6P09630 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC6P09630 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.52■□□□□ 0.56
HOXC6P09630 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.52■□□□□ 0.56
HOXC6P09630 MYCLP2-201ENST00000449268 967 ntBASIC18.52■□□□□ 0.56
HOXC6P09630 ELK1P1-201ENST00000485699 580 ntBASIC18.52■□□□□ 0.56
HOXC6P09630 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC6P09630 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC6P09630 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC6P09630 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC6P09630 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC6P09630 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.52■□□□□ 0.56
HOXC6P09630 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HOXC6P09630 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC6P09630 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.52■□□□□ 0.56
HOXC6P09630 MIR6069-201ENST00000620069 79 ntBASIC18.52■□□□□ 0.56
HOXC6P09630 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC6P09630 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.52■□□□□ 0.56
HOXC6P09630 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.52■□□□□ 0.56
HOXC6P09630 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HOXC6P09630 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HOXC6P09630 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HOXC6P09630 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HOXC6P09630 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HOXC6P09630 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
HOXC6P09630 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HOXC6P09630 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.52■□□□□ 0.55
HOXC6P09630 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HOXC6P09630 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HOXC6P09630 AL512652.2-201ENST00000625156 1716 ntBASIC18.52■□□□□ 0.55
HOXC6P09630 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HOXC6P09630 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.51■□□□□ 0.55
HOXC6P09630 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HOXC6P09630 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.51■□□□□ 0.55
HOXC6P09630 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.51■□□□□ 0.55
HOXC6P09630 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HOXC6P09630 FZD10-202ENST00000539839 3282 ntBASIC18.51■□□□□ 0.55
HOXC6P09630 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 MIR658-201ENST00000385210 100 ntBASIC18.51■□□□□ 0.55
HOXC6P09630 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.51■□□□□ 0.55
HOXC6P09630 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HOXC6P09630 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 AC092337.1-201ENST00000568699 1129 ntBASIC18.51■□□□□ 0.55
HOXC6P09630 CTBP2P3-201ENST00000585629 1255 ntBASIC18.51■□□□□ 0.55
HOXC6P09630 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.51■□□□□ 0.55
HOXC6P09630 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.51■□□□□ 0.55
HOXC6P09630 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HOXC6P09630 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HOXC6P09630 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.5■□□□□ 0.55
HOXC6P09630 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.5■□□□□ 0.55
HOXC6P09630 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms