Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.65■□□□□ 0.26
RETP07949 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RETP07949 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.65■□□□□ 0.26
RETP07949 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RETP07949 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RETP07949 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
RETP07949 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.65■□□□□ 0.26
RETP07949 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
RETP07949 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.64■□□□□ 0.25
RETP07949 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.64■□□□□ 0.25
RETP07949 AC106886.4-201ENST00000623557 2502 ntBASIC16.64■□□□□ 0.25
RETP07949 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RETP07949 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
RETP07949 AL512384.1-201ENST00000406683 331 ntBASIC16.64■□□□□ 0.25
RETP07949 HCG4-201ENST00000418983 998 ntBASIC16.64■□□□□ 0.25
RETP07949 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
RETP07949 RN7SL752P-201ENST00000463779 287 ntBASIC16.64■□□□□ 0.25
RETP07949 AC011495.1-201ENST00000498085 584 ntBASIC16.64■□□□□ 0.25
RETP07949 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.64■□□□□ 0.25
RETP07949 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.64■□□□□ 0.25
RETP07949 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.64■□□□□ 0.25
RETP07949 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.64■□□□□ 0.25
RETP07949 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.64■□□□□ 0.25
RETP07949 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.64■□□□□ 0.25
RETP07949 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.64■□□□□ 0.25
RETP07949 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RETP07949 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RETP07949 AL353732.1-201ENST00000569618 1459 ntBASIC16.64■□□□□ 0.25
RETP07949 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.64■□□□□ 0.25
RETP07949 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RETP07949 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
RETP07949 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RETP07949 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RETP07949 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RETP07949 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RETP07949 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.64■□□□□ 0.25
RETP07949 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RETP07949 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.63■□□□□ 0.25
RETP07949 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RETP07949 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.63■□□□□ 0.25
RETP07949 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RETP07949 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.63■□□□□ 0.25
RETP07949 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
RETP07949 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.63■□□□□ 0.25
RETP07949 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.63■□□□□ 0.25
RETP07949 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.63■□□□□ 0.25
RETP07949 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.63■□□□□ 0.25
RETP07949 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RETP07949 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.63■□□□□ 0.25
RETP07949 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.63■□□□□ 0.25
RETP07949 AC104794.3-201ENST00000566840 1248 ntBASIC16.63■□□□□ 0.25
RETP07949 MIR3909-201ENST00000579518 119 ntBASIC16.63■□□□□ 0.25
RETP07949 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.63■□□□□ 0.25
RETP07949 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RETP07949 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RETP07949 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RETP07949 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.63■□□□□ 0.25
RETP07949 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RETP07949 AGGF1P2-201ENST00000426656 2106 ntBASIC16.63■□□□□ 0.25
RETP07949 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms