Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-ND3P03897 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
MT-ND3P03897 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MT-ND3P03897 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MT-ND3P03897 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-ND3P03897 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
MT-ND3P03897 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-ND3P03897 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-ND3P03897 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-ND3P03897 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-ND3P03897 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-ND3P03897 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.93■□□□□ 0.3
MT-ND3P03897 AP001269.4-201ENST00000609611 512 ntBASIC16.93■□□□□ 0.3
MT-ND3P03897 AC023511.2-201ENST00000618803 211 ntBASIC16.93■□□□□ 0.3
MT-ND3P03897 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-ND3P03897 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MT-ND3P03897 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.93■□□□□ 0.3
MT-ND3P03897 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
MT-ND3P03897 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
MT-ND3P03897 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-ND3P03897 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 NORAD-201ENST00000565493 5339 ntBASIC16.93■□□□□ 0.3
MT-ND3P03897 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 AC068587.6-202ENST00000641839 5619 ntBASIC16.93■□□□□ 0.3
MT-ND3P03897 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-ND3P03897 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.92■□□□□ 0.3
MT-ND3P03897 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
MT-ND3P03897 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MT-ND3P03897 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.92■□□□□ 0.3
MT-ND3P03897 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MT-ND3P03897 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.92■□□□□ 0.3
MT-ND3P03897 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.92■□□□□ 0.3
MT-ND3P03897 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
MT-ND3P03897 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
MT-ND3P03897 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MT-ND3P03897 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.92■□□□□ 0.3
MT-ND3P03897 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.92■□□□□ 0.3
MT-ND3P03897 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.92■□□□□ 0.3
MT-ND3P03897 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.92■□□□□ 0.3
MT-ND3P03897 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 AF228730.7-201ENST00000641842 219 ntBASIC16.92■□□□□ 0.3
MT-ND3P03897 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 KRT8P49-201ENST00000604166 1432 ntBASIC16.92■□□□□ 0.3
MT-ND3P03897 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MT-ND3P03897 PMPCAP1-201ENST00000508114 1576 ntBASIC16.92■□□□□ 0.3
MT-ND3P03897 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.92■□□□□ 0.3
MT-ND3P03897 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MT-ND3P03897 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MT-ND3P03897 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.92■□□□□ 0.3
MT-ND3P03897 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.91■□□□□ 0.3
MT-ND3P03897 AC097637.2-201ENST00000624096 1997 ntBASIC16.91■□□□□ 0.3
MT-ND3P03897 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.91■□□□□ 0.3
MT-ND3P03897 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.91■□□□□ 0.3
MT-ND3P03897 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MT-ND3P03897 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms