Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MT-ND1P03886 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND1P03886 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-ND1P03886 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-ND1P03886 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-ND1P03886 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.68■□□□□ 0.1
MT-ND1P03886 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.68■□□□□ 0.1
MT-ND1P03886 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MT-ND1P03886 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND1P03886 AC006277.1-201ENST00000624348 1610 ntBASIC15.68■□□□□ 0.1
MT-ND1P03886 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND1P03886 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND1P03886 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND1P03886 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MT-ND1P03886 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MT-ND1P03886 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND1P03886 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
MT-ND1P03886 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
MT-ND1P03886 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.67■□□□□ 0.1
MT-ND1P03886 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
MT-ND1P03886 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-ND1P03886 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
MT-ND1P03886 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 BNIP3P18-201ENST00000593976 575 ntBASIC15.67■□□□□ 0.1
MT-ND1P03886 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-ND1P03886 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MT-ND1P03886 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 NSUN5P1-202ENST00000421140 1535 ntBASIC15.67■□□□□ 0.1
MT-ND1P03886 NSUN5P2-203ENST00000457352 1529 ntBASIC15.67■□□□□ 0.1
MT-ND1P03886 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 KRT8P49-201ENST00000604166 1432 ntBASIC15.67■□□□□ 0.1
MT-ND1P03886 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 AC004817.3-201ENST00000602957 2129 ntBASIC15.67■□□□□ 0.1
MT-ND1P03886 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MT-ND1P03886 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-ND1P03886 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.66■□□□□ 0.1
MT-ND1P03886 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MT-ND1P03886 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 REXO1L8P-201ENST00000604378 1897 ntBASIC15.66■□□□□ 0.1
MT-ND1P03886 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
MT-ND1P03886 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.66■□□□□ 0.1
MT-ND1P03886 IGHV3-47-201ENST00000425060 335 ntBASIC15.66■□□□□ 0.1
MT-ND1P03886 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 LINC00265-3P-201ENST00000447588 903 ntBASIC15.66■□□□□ 0.1
MT-ND1P03886 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.66■□□□□ 0.1
MT-ND1P03886 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.66■□□□□ 0.1
MT-ND1P03886 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
MT-ND1P03886 AC096582.2-201ENST00000510860 516 ntBASIC15.66■□□□□ 0.1
MT-ND1P03886 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.66■□□□□ 0.1
MT-ND1P03886 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.66■□□□□ 0.1
MT-ND1P03886 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
MT-ND1P03886 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.66■□□□□ 0.1
MT-ND1P03886 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.66■□□□□ 0.1
MT-ND1P03886 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MT-ND1P03886 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 PMPCAP1-201ENST00000508114 1576 ntBASIC15.66■□□□□ 0.1
MT-ND1P03886 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.66■□□□□ 0.1
MT-ND1P03886 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MT-ND1P03886 AC097637.2-201ENST00000624096 1997 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms