Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HLA-DRAP01903 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.75■□□□□ 0.43
HLA-DRAP01903 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.75■□□□□ 0.43
HLA-DRAP01903 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HLA-DRAP01903 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DRAP01903 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 ELL2P1-201ENST00000413990 1906 ntBASIC17.75■□□□□ 0.43
HLA-DRAP01903 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
HLA-DRAP01903 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.75■□□□□ 0.43
HLA-DRAP01903 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.75■□□□□ 0.43
HLA-DRAP01903 UPF3AP3-201ENST00000420996 769 ntBASIC17.75■□□□□ 0.43
HLA-DRAP01903 ACTG1P14-201ENST00000446382 1122 ntBASIC17.75■□□□□ 0.43
HLA-DRAP01903 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DRAP01903 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.75■□□□□ 0.43
HLA-DRAP01903 AL138918.1-201ENST00000568306 659 ntBASIC17.75■□□□□ 0.43
HLA-DRAP01903 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DRAP01903 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DRAP01903 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 AC073439.1-201ENST00000624121 1774 ntBASIC17.74■□□□□ 0.43
HLA-DRAP01903 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 AC093724.1-201ENST00000448659 1027 ntBASIC17.74■□□□□ 0.43
HLA-DRAP01903 CEND1P1-201ENST00000451006 455 ntBASIC17.74■□□□□ 0.43
HLA-DRAP01903 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 KRT8P48-201ENST00000515599 1220 ntBASIC17.74■□□□□ 0.43
HLA-DRAP01903 FAM86C2P-203ENST00000528684 1004 ntBASIC17.74■□□□□ 0.43
HLA-DRAP01903 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HLA-DRAP01903 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DRAP01903 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms