Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TIMP1P01033 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 AL136982.4-201ENST00000437689 1740 ntBASIC17.64■□□□□ 0.41
TIMP1P01033 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TIMP1P01033 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TIMP1P01033 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.63■□□□□ 0.41
TIMP1P01033 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.63■□□□□ 0.41
TIMP1P01033 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.63■□□□□ 0.41
TIMP1P01033 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.63■□□□□ 0.41
TIMP1P01033 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.63■□□□□ 0.41
TIMP1P01033 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
TIMP1P01033 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TIMP1P01033 AP000812.2-201ENST00000538934 718 ntBASIC17.63■□□□□ 0.41
TIMP1P01033 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.63■□□□□ 0.41
TIMP1P01033 LINC01115-203ENST00000606068 577 ntBASIC17.63■□□□□ 0.41
TIMP1P01033 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.63■□□□□ 0.41
TIMP1P01033 AL158212.4-201ENST00000624062 1286 ntBASIC17.63■□□□□ 0.41
TIMP1P01033 AL139099.5-201ENST00000635274 300 ntBASIC17.63■□□□□ 0.41
TIMP1P01033 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
TIMP1P01033 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.63■□□□□ 0.41
TIMP1P01033 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.63■□□□□ 0.41
TIMP1P01033 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TIMP1P01033 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TIMP1P01033 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 AC092068.3-201ENST00000587894 2016 ntBASIC17.62■□□□□ 0.41
TIMP1P01033 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.62■□□□□ 0.41
TIMP1P01033 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 AC020763.4-201ENST00000623414 4170 ntBASIC17.62■□□□□ 0.41
TIMP1P01033 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.62■□□□□ 0.41
TIMP1P01033 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
TIMP1P01033 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 GOLGA2P4-201ENST00000441462 777 ntBASIC17.62■□□□□ 0.41
TIMP1P01033 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.62■□□□□ 0.41
TIMP1P01033 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.62■□□□□ 0.41
TIMP1P01033 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TIMP1P01033 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.62■□□□□ 0.41
TIMP1P01033 ENPP7P5-201ENST00000541031 1031 ntBASIC17.62■□□□□ 0.41
TIMP1P01033 PTP4A1P2-201ENST00000546033 454 ntBASIC17.62■□□□□ 0.41
TIMP1P01033 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.62■□□□□ 0.41
TIMP1P01033 MIR3615-201ENST00000581999 87 ntBASIC17.62■□□□□ 0.41
TIMP1P01033 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TIMP1P01033 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.62■□□□□ 0.41
TIMP1P01033 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.62■□□□□ 0.41
TIMP1P01033 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.62■□□□□ 0.41
TIMP1P01033 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.62■□□□□ 0.41
TIMP1P01033 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.62■□□□□ 0.41
TIMP1P01033 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TIMP1P01033 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.62■□□□□ 0.41
TIMP1P01033 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TIMP1P01033 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
TIMP1P01033 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TIMP1P01033 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.61■□□□□ 0.41
TIMP1P01033 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.61■□□□□ 0.41
TIMP1P01033 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TIMP1P01033 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TIMP1P01033 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.61■□□□□ 0.41
TIMP1P01033 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.61■□□□□ 0.41
TIMP1P01033 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.61■□□□□ 0.41
TIMP1P01033 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms