Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL645929.1-201ENST00000420084 975 ntBASIC15.7■□□□□ 0.1
CLPTM1O96005 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.7■□□□□ 0.1
CLPTM1O96005 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.7■□□□□ 0.1
CLPTM1O96005 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.7■□□□□ 0.1
CLPTM1O96005 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.7■□□□□ 0.1
CLPTM1O96005 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.7■□□□□ 0.1
CLPTM1O96005 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CLPTM1O96005 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLPTM1O96005 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.7■□□□□ 0.1
CLPTM1O96005 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.7■□□□□ 0.1
CLPTM1O96005 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLPTM1O96005 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.7■□□□□ 0.1
CLPTM1O96005 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CLPTM1O96005 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLPTM1O96005 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLPTM1O96005 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLPTM1O96005 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.69■□□□□ 0.1
CLPTM1O96005 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.69■□□□□ 0.1
CLPTM1O96005 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLPTM1O96005 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.69■□□□□ 0.1
CLPTM1O96005 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CLPTM1O96005 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.69■□□□□ 0.1
CLPTM1O96005 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.69■□□□□ 0.1
CLPTM1O96005 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.69■□□□□ 0.1
CLPTM1O96005 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CLPTM1O96005 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.69■□□□□ 0.1
CLPTM1O96005 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLPTM1O96005 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLPTM1O96005 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLPTM1O96005 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.69■□□□□ 0.1
CLPTM1O96005 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLPTM1O96005 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLPTM1O96005 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLPTM1O96005 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
CLPTM1O96005 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.68■□□□□ 0.1
CLPTM1O96005 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.68■□□□□ 0.1
CLPTM1O96005 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.68■□□□□ 0.1
CLPTM1O96005 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.68■□□□□ 0.1
CLPTM1O96005 IER3-202ENST00000376377 1350 ntBASIC15.68■□□□□ 0.1
CLPTM1O96005 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 MIR662-201ENST00000384847 95 ntBASIC15.68■□□□□ 0.1
CLPTM1O96005 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.68■□□□□ 0.1
CLPTM1O96005 AC091076.1-201ENST00000610741 619 ntBASIC15.68■□□□□ 0.1
CLPTM1O96005 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 AC116407.4-201ENST00000623319 1061 ntBASIC15.68■□□□□ 0.1
CLPTM1O96005 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 AP000550.4-202ENST00000639755 178 ntBASIC15.68■□□□□ 0.1
CLPTM1O96005 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.68■□□□□ 0.1
CLPTM1O96005 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.68■□□□□ 0.1
CLPTM1O96005 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLPTM1O96005 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms