Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRUB2O95900 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.31■□□□□ 0.36
TRUB2O95900 MIR1233-2-201ENST00000408138 82 ntBASIC17.31■□□□□ 0.36
TRUB2O95900 MIR1233-1-201ENST00000408722 82 ntBASIC17.31■□□□□ 0.36
TRUB2O95900 AL355306.1-201ENST00000415580 579 ntBASIC17.31■□□□□ 0.36
TRUB2O95900 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.31■□□□□ 0.36
TRUB2O95900 AL671277.1-201ENST00000429656 993 ntBASIC17.31■□□□□ 0.36
TRUB2O95900 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.31■□□□□ 0.36
TRUB2O95900 ADH5P3-201ENST00000433842 1137 ntBASIC17.31■□□□□ 0.36
TRUB2O95900 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
TRUB2O95900 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRUB2O95900 RARRES2P8-201ENST00000566335 367 ntBASIC17.31■□□□□ 0.36
TRUB2O95900 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.31■□□□□ 0.36
TRUB2O95900 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.31■□□□□ 0.36
TRUB2O95900 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRUB2O95900 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRUB2O95900 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.31■□□□□ 0.36
TRUB2O95900 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.31■□□□□ 0.36
TRUB2O95900 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRUB2O95900 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRUB2O95900 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TRUB2O95900 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.31■□□□□ 0.36
TRUB2O95900 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
TRUB2O95900 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRUB2O95900 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRUB2O95900 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRUB2O95900 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.31■□□□□ 0.36
TRUB2O95900 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRUB2O95900 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.31■□□□□ 0.36
TRUB2O95900 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRUB2O95900 WASH6P-202ENST00000359512 1437 ntBASIC17.3■□□□□ 0.36
TRUB2O95900 AL391005.1-201ENST00000623953 2435 ntBASIC17.3■□□□□ 0.36
TRUB2O95900 LINC01144-201ENST00000626198 1710 ntBASIC17.3■□□□□ 0.36
TRUB2O95900 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRUB2O95900 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 AC016027.1-202ENST00000607927 1699 ntBASIC17.3■□□□□ 0.36
TRUB2O95900 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRUB2O95900 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.3■□□□□ 0.36
TRUB2O95900 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRUB2O95900 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.3■□□□□ 0.36
TRUB2O95900 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.3■□□□□ 0.36
TRUB2O95900 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.3■□□□□ 0.36
TRUB2O95900 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.3■□□□□ 0.36
TRUB2O95900 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
TRUB2O95900 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.3■□□□□ 0.36
TRUB2O95900 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TRUB2O95900 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 AC055717.3-201ENST00000622967 595 ntBASIC17.3■□□□□ 0.36
TRUB2O95900 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.3■□□□□ 0.36
TRUB2O95900 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRUB2O95900 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRUB2O95900 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TRUB2O95900 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRUB2O95900 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRUB2O95900 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.3■□□□□ 0.36
TRUB2O95900 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.3■□□□□ 0.36
TRUB2O95900 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.3■□□□□ 0.36
TRUB2O95900 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRUB2O95900 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRUB2O95900 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.29■□□□□ 0.36
TRUB2O95900 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRUB2O95900 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.29■□□□□ 0.36
TRUB2O95900 MTHFR-217ENST00000641820 1569 ntBASIC17.29■□□□□ 0.36
TRUB2O95900 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.29■□□□□ 0.36
TRUB2O95900 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.29■□□□□ 0.36
TRUB2O95900 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.29■□□□□ 0.36
TRUB2O95900 AC211486.1-202ENST00000416371 468 ntBASIC17.29■□□□□ 0.36
TRUB2O95900 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.29■□□□□ 0.36
TRUB2O95900 AC211476.1-201ENST00000503899 468 ntBASIC17.29■□□□□ 0.36
TRUB2O95900 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.29■□□□□ 0.36
TRUB2O95900 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.29■□□□□ 0.36
TRUB2O95900 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.29■□□□□ 0.36
TRUB2O95900 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.29■□□□□ 0.36
TRUB2O95900 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.29■□□□□ 0.36
TRUB2O95900 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms