Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 LINC02447-202ENST00000501888 2146 ntBASIC14.39□□□□□ -0.11
CCNKO75909 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.39□□□□□ -0.11
CCNKO75909 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.39□□□□□ -0.11
CCNKO75909 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.39□□□□□ -0.11
CCNKO75909 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 AC067750.1-201ENST00000608826 6545 ntBASIC14.39□□□□□ -0.11
CCNKO75909 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCNKO75909 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.39□□□□□ -0.11
CCNKO75909 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCNKO75909 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.39□□□□□ -0.11
CCNKO75909 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.39□□□□□ -0.11
CCNKO75909 MESTP1-201ENST00000404287 994 ntBASIC14.39□□□□□ -0.11
CCNKO75909 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CCNKO75909 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCNKO75909 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.39□□□□□ -0.11
CCNKO75909 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.39□□□□□ -0.11
CCNKO75909 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.39□□□□□ -0.11
CCNKO75909 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.39□□□□□ -0.11
CCNKO75909 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CCNKO75909 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.39□□□□□ -0.11
CCNKO75909 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.39□□□□□ -0.11
CCNKO75909 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCNKO75909 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.39□□□□□ -0.11
CCNKO75909 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCNKO75909 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCNKO75909 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.39□□□□□ -0.11
CCNKO75909 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.38□□□□□ -0.11
CCNKO75909 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.38□□□□□ -0.11
CCNKO75909 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CCNKO75909 CDC14C-201ENST00000428251 1719 ntBASIC14.38□□□□□ -0.11
CCNKO75909 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.38□□□□□ -0.11
CCNKO75909 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CCNKO75909 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.38□□□□□ -0.11
CCNKO75909 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CCNKO75909 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.38□□□□□ -0.11
CCNKO75909 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CCNKO75909 AL390755.1-201ENST00000623716 2027 ntBASIC14.38□□□□□ -0.11
CCNKO75909 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.38□□□□□ -0.11
CCNKO75909 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCNKO75909 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.38□□□□□ -0.11
CCNKO75909 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 AP000692.2-201ENST00000608391 879 ntBASIC14.38□□□□□ -0.11
CCNKO75909 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.38□□□□□ -0.11
CCNKO75909 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCNKO75909 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.38□□□□□ -0.11
CCNKO75909 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
CCNKO75909 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CCNKO75909 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 EGFEM1P-202ENST00000431685 1563 ntBASIC14.38□□□□□ -0.11
CCNKO75909 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.38□□□□□ -0.11
CCNKO75909 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.38□□□□□ -0.11
CCNKO75909 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.38□□□□□ -0.11
CCNKO75909 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
CCNKO75909 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms