Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PTP4A3O75365 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 AC012640.2-201ENST00000561606 901 ntBASIC14.93□□□□□ -0.02
PTP4A3O75365 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.93□□□□□ -0.02
PTP4A3O75365 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.93□□□□□ -0.02
PTP4A3O75365 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.93□□□□□ -0.02
PTP4A3O75365 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.93□□□□□ -0.02
PTP4A3O75365 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.93□□□□□ -0.02
PTP4A3O75365 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
PTP4A3O75365 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.93□□□□□ -0.02
PTP4A3O75365 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
PTP4A3O75365 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A3O75365 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
PTP4A3O75365 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.92□□□□□ -0.02
PTP4A3O75365 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PTP4A3O75365 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 AC112504.1-201ENST00000623415 1841 ntBASIC14.92□□□□□ -0.02
PTP4A3O75365 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.92□□□□□ -0.02
PTP4A3O75365 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PTP4A3O75365 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PTP4A3O75365 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PTP4A3O75365 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 FAM197Y8-203ENST00000450145 560 ntBASIC14.92□□□□□ -0.02
PTP4A3O75365 AC018712.1-201ENST00000455767 687 ntBASIC14.92□□□□□ -0.02
PTP4A3O75365 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.92□□□□□ -0.02
PTP4A3O75365 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.92□□□□□ -0.02
PTP4A3O75365 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.92□□□□□ -0.02
PTP4A3O75365 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.92□□□□□ -0.02
PTP4A3O75365 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PTP4A3O75365 MIR1199-201ENST00000621445 119 ntBASIC14.92□□□□□ -0.02
PTP4A3O75365 AC004790.2-201ENST00000623588 572 ntBASIC14.92□□□□□ -0.02
PTP4A3O75365 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.92□□□□□ -0.02
PTP4A3O75365 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PTP4A3O75365 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.92□□□□□ -0.02
PTP4A3O75365 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
PTP4A3O75365 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PTP4A3O75365 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PTP4A3O75365 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 AC005622.1-201ENST00000636801 1703 ntBASIC14.92□□□□□ -0.02
PTP4A3O75365 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PTP4A3O75365 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A3O75365 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.92□□□□□ -0.02
PTP4A3O75365 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.91□□□□□ -0.02
PTP4A3O75365 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PTP4A3O75365 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PTP4A3O75365 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PTP4A3O75365 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.91□□□□□ -0.02
PTP4A3O75365 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 AP002414.3-201ENST00000589352 1468 ntBASIC14.91□□□□□ -0.02
PTP4A3O75365 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.91□□□□□ -0.02
PTP4A3O75365 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PTP4A3O75365 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PTP4A3O75365 MRPL20P1-201ENST00000400819 433 ntBASIC14.91□□□□□ -0.02
PTP4A3O75365 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.91□□□□□ -0.02
PTP4A3O75365 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.91□□□□□ -0.02
PTP4A3O75365 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.91□□□□□ -0.02
PTP4A3O75365 MIR4515-201ENST00000584082 81 ntBASIC14.91□□□□□ -0.02
PTP4A3O75365 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.91□□□□□ -0.02
PTP4A3O75365 ACTL9-202ENST00000612068 1252 ntBASIC14.91□□□□□ -0.02
PTP4A3O75365 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 CDC14C-201ENST00000428251 1719 ntBASIC14.91□□□□□ -0.02
PTP4A3O75365 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PTP4A3O75365 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.91□□□□□ -0.02
PTP4A3O75365 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTP4A3O75365 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.91□□□□□ -0.02
PTP4A3O75365 AL592424.1-201ENST00000563624 1536 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms