Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.87■□□□□ 0.13
GFRA3O60609 AL158212.4-201ENST00000624062 1286 ntBASIC15.87■□□□□ 0.13
GFRA3O60609 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
GFRA3O60609 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
GFRA3O60609 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.87■□□□□ 0.13
GFRA3O60609 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
GFRA3O60609 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
GFRA3O60609 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.86■□□□□ 0.13
GFRA3O60609 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.86■□□□□ 0.13
GFRA3O60609 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.86■□□□□ 0.13
GFRA3O60609 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
GFRA3O60609 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
GFRA3O60609 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
GFRA3O60609 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.86■□□□□ 0.13
GFRA3O60609 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
GFRA3O60609 AC134915.1-201ENST00000426461 574 ntBASIC15.86■□□□□ 0.13
GFRA3O60609 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.86■□□□□ 0.13
GFRA3O60609 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
GFRA3O60609 RPL13AP19-201ENST00000434320 584 ntBASIC15.86■□□□□ 0.13
GFRA3O60609 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.86■□□□□ 0.13
GFRA3O60609 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.86■□□□□ 0.13
GFRA3O60609 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
GFRA3O60609 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.86■□□□□ 0.13
GFRA3O60609 MIR3147-201ENST00000577811 66 ntBASIC15.86■□□□□ 0.13
GFRA3O60609 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.86■□□□□ 0.13
GFRA3O60609 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
GFRA3O60609 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.86■□□□□ 0.13
GFRA3O60609 AL451050.2-201ENST00000606967 682 ntBASIC15.86■□□□□ 0.13
GFRA3O60609 AL391069.4-201ENST00000609583 481 ntBASIC15.86■□□□□ 0.13
GFRA3O60609 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.86■□□□□ 0.13
GFRA3O60609 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.86■□□□□ 0.13
GFRA3O60609 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GFRA3O60609 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
GFRA3O60609 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.85■□□□□ 0.13
GFRA3O60609 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.85■□□□□ 0.13
GFRA3O60609 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
GFRA3O60609 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.85■□□□□ 0.13
GFRA3O60609 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GFRA3O60609 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.85■□□□□ 0.13
GFRA3O60609 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GFRA3O60609 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.85■□□□□ 0.13
GFRA3O60609 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.85■□□□□ 0.13
GFRA3O60609 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.85■□□□□ 0.13
GFRA3O60609 FAM86LP-201ENST00000478302 853 ntBASIC15.85■□□□□ 0.13
GFRA3O60609 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GFRA3O60609 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.85■□□□□ 0.13
GFRA3O60609 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.85■□□□□ 0.13
GFRA3O60609 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.85■□□□□ 0.13
GFRA3O60609 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.85■□□□□ 0.13
GFRA3O60609 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.85■□□□□ 0.13
GFRA3O60609 AC137695.1-201ENST00000604126 489 ntBASIC15.85■□□□□ 0.13
GFRA3O60609 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.85■□□□□ 0.13
GFRA3O60609 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GFRA3O60609 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFRA3O60609 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.84■□□□□ 0.13
GFRA3O60609 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
GFRA3O60609 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GFRA3O60609 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
GFRA3O60609 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFRA3O60609 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
GFRA3O60609 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
GFRA3O60609 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.84■□□□□ 0.13
GFRA3O60609 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.84■□□□□ 0.13
GFRA3O60609 AC004408.2-201ENST00000623613 2777 ntBASIC15.84■□□□□ 0.13
GFRA3O60609 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFRA3O60609 CNN2P8-201ENST00000421872 913 ntBASIC15.84■□□□□ 0.13
GFRA3O60609 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFRA3O60609 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms