Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMARCA5O60264 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.39■□□□□ 0.86
SMARCA5O60264 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
SMARCA5O60264 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.39■□□□□ 0.85
SMARCA5O60264 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
SMARCA5O60264 ALG1L5P-201ENST00000482043 771 ntBASIC20.39■□□□□ 0.85
SMARCA5O60264 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SMARCA5O60264 AC040169.1-201ENST00000565382 521 ntBASIC20.39■□□□□ 0.85
SMARCA5O60264 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SMARCA5O60264 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 AC092902.6-201ENST00000641783 218 ntBASIC20.39■□□□□ 0.85
SMARCA5O60264 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCA5O60264 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SMARCA5O60264 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SMARCA5O60264 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCA5O60264 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCA5O60264 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCA5O60264 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SMARCA5O60264 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.39■□□□□ 0.85
SMARCA5O60264 LINC01144-201ENST00000626198 1710 ntBASIC20.39■□□□□ 0.85
SMARCA5O60264 AC005622.1-201ENST00000636801 1703 ntBASIC20.39■□□□□ 0.85
SMARCA5O60264 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCA5O60264 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SMARCA5O60264 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SMARCA5O60264 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SMARCA5O60264 AC026691.1-201ENST00000602502 2017 ntBASIC20.38■□□□□ 0.85
SMARCA5O60264 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SMARCA5O60264 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCA5O60264 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.38■□□□□ 0.85
SMARCA5O60264 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCA5O60264 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC20.38■□□□□ 0.85
SMARCA5O60264 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCA5O60264 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.38■□□□□ 0.85
SMARCA5O60264 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SMARCA5O60264 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCA5O60264 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCA5O60264 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SMARCA5O60264 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMARCA5O60264 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCA5O60264 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCA5O60264 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.37■□□□□ 0.85
SMARCA5O60264 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCA5O60264 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCA5O60264 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCA5O60264 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCA5O60264 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCA5O60264 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SMARCA5O60264 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCA5O60264 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCA5O60264 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.37■□□□□ 0.85
SMARCA5O60264 FAM58CP-201ENST00000435741 640 ntBASIC20.37■□□□□ 0.85
SMARCA5O60264 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.37■□□□□ 0.85
SMARCA5O60264 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCA5O60264 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.37■□□□□ 0.85
SMARCA5O60264 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
SMARCA5O60264 AC020765.3-201ENST00000613051 740 ntBASIC20.37■□□□□ 0.85
SMARCA5O60264 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
SMARCA5O60264 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SMARCA5O60264 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SMARCA5O60264 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.37■□□□□ 0.85
SMARCA5O60264 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMARCA5O60264 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms