Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
MSH5O43196 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC22.98■■□□□ 1.27
MSH5O43196 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
MSH5O43196 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
MSH5O43196 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
MSH5O43196 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC22.97■■□□□ 1.27
MSH5O43196 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 ZNF738-202ENST00000380870 1142 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
MSH5O43196 MIR149-201ENST00000384879 89 ntBASIC22.97■■□□□ 1.27
MSH5O43196 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC22.97■■□□□ 1.27
MSH5O43196 LAGE3P1-201ENST00000425356 484 ntBASIC22.97■■□□□ 1.27
MSH5O43196 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC22.97■■□□□ 1.27
MSH5O43196 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 BX005266.1-201ENST00000473402 457 ntBASIC22.97■■□□□ 1.27
MSH5O43196 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.97■■□□□ 1.27
MSH5O43196 Y_RNA.717-201ENST00000517106 92 ntBASIC22.97■■□□□ 1.27
MSH5O43196 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC22.97■■□□□ 1.27
MSH5O43196 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
MSH5O43196 AC010857.1-201ENST00000606398 594 ntBASIC22.97■■□□□ 1.27
MSH5O43196 AP003072.3-201ENST00000623456 594 ntBASIC22.97■■□□□ 1.27
MSH5O43196 AC073592.7-201ENST00000623659 507 ntBASIC22.97■■□□□ 1.27
MSH5O43196 AC005593.1-201ENST00000624894 515 ntBASIC22.97■■□□□ 1.27
MSH5O43196 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC22.97■■□□□ 1.27
MSH5O43196 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
MSH5O43196 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
MSH5O43196 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC22.96■■□□□ 1.27
MSH5O43196 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
MSH5O43196 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
MSH5O43196 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
MSH5O43196 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.96■■□□□ 1.27
MSH5O43196 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.96■■□□□ 1.27
MSH5O43196 SNX10-203ENST00000409367 746 ntTSL 5 BASIC22.96■■□□□ 1.27
MSH5O43196 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.96■■□□□ 1.27
MSH5O43196 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC22.96■■□□□ 1.27
MSH5O43196 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
MSH5O43196 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC22.96■■□□□ 1.27
MSH5O43196 RN7SKP105-201ENST00000517192 314 ntBASIC22.96■■□□□ 1.27
MSH5O43196 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC22.96■■□□□ 1.27
MSH5O43196 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.96■■□□□ 1.27
MSH5O43196 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC22.96■■□□□ 1.27
MSH5O43196 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC22.96■■□□□ 1.27
MSH5O43196 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.96■■□□□ 1.27
MSH5O43196 AC245519.2-201ENST00000633673 475 ntTSL 3 BASIC22.96■■□□□ 1.27
MSH5O43196 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 RPL23AP49-202ENST00000638439 1138 ntTSL 5 BASIC22.96■■□□□ 1.27
MSH5O43196 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.96■■□□□ 1.27
MSH5O43196 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
MSH5O43196 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.27
MSH5O43196 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
MSH5O43196 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
MSH5O43196 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
MSH5O43196 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
MSH5O43196 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
MSH5O43196 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.95■■□□□ 1.26
MSH5O43196 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC22.95■■□□□ 1.26
MSH5O43196 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.95■■□□□ 1.26
MSH5O43196 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.95■■□□□ 1.26
MSH5O43196 PRELID3BP10-201ENST00000431957 584 ntBASIC22.95■■□□□ 1.26
MSH5O43196 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
MSH5O43196 KRT18P2-201ENST00000447938 1258 ntBASIC22.95■■□□□ 1.26
MSH5O43196 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
MSH5O43196 ALG1L5P-201ENST00000482043 771 ntBASIC22.95■■□□□ 1.26
MSH5O43196 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
MSH5O43196 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC22.95■■□□□ 1.26
MSH5O43196 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
MSH5O43196 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
MSH5O43196 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.95■■□□□ 1.26
MSH5O43196 AC011467.4-201ENST00000594891 528 ntBASIC22.95■■□□□ 1.26
MSH5O43196 AC239800.4-201ENST00000603712 296 ntBASIC22.95■■□□□ 1.26
MSH5O43196 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC22.95■■□□□ 1.26
MSH5O43196 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC22.95■■□□□ 1.26
MSH5O43196 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC22.95■■□□□ 1.26
MSH5O43196 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms