Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.09■□□□□ 0.97
CHL1O00533 HLA-V-204ENST00000476601 1289 ntBASIC21.09■□□□□ 0.97
CHL1O00533 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.09■□□□□ 0.97
CHL1O00533 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.09■□□□□ 0.97
CHL1O00533 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.09■□□□□ 0.97
CHL1O00533 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CHL1O00533 AL365330.1-201ENST00000607459 531 ntBASIC21.09■□□□□ 0.97
CHL1O00533 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.09■□□□□ 0.97
CHL1O00533 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC21.09■□□□□ 0.97
CHL1O00533 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHL1O00533 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.09■□□□□ 0.97
CHL1O00533 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CHL1O00533 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CHL1O00533 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC21.08■□□□□ 0.97
CHL1O00533 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHL1O00533 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHL1O00533 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC21.08■□□□□ 0.97
CHL1O00533 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHL1O00533 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHL1O00533 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHL1O00533 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHL1O00533 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHL1O00533 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHL1O00533 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.08■□□□□ 0.97
CHL1O00533 TSSK5P-201ENST00000423978 907 ntBASIC21.08■□□□□ 0.97
CHL1O00533 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHL1O00533 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHL1O00533 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.08■□□□□ 0.97
CHL1O00533 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.08■□□□□ 0.97
CHL1O00533 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHL1O00533 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.08■□□□□ 0.97
CHL1O00533 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.08■□□□□ 0.97
CHL1O00533 AL096865.1-201ENST00000606796 927 ntBASIC21.08■□□□□ 0.97
CHL1O00533 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.08■□□□□ 0.97
CHL1O00533 AC073592.8-201ENST00000624126 511 ntBASIC21.08■□□□□ 0.97
CHL1O00533 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHL1O00533 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC21.08■□□□□ 0.96
CHL1O00533 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHL1O00533 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.07■□□□□ 0.96
CHL1O00533 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 PCDHA14-201ENST00000506751 2298 ntBASIC21.07■□□□□ 0.96
CHL1O00533 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.07■□□□□ 0.96
CHL1O00533 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CHL1O00533 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.07■□□□□ 0.96
CHL1O00533 RPL37AP1-201ENST00000412502 279 ntBASIC21.07■□□□□ 0.96
CHL1O00533 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.07■□□□□ 0.96
CHL1O00533 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.07■□□□□ 0.96
CHL1O00533 AL590560.3-201ENST00000623350 461 ntBASIC21.07■□□□□ 0.96
CHL1O00533 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CHL1O00533 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.07■□□□□ 0.96
CHL1O00533 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.07■□□□□ 0.96
CHL1O00533 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC21.07■□□□□ 0.96
CHL1O00533 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHL1O00533 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.07■□□□□ 0.96
CHL1O00533 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CHL1O00533 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CHL1O00533 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CHL1O00533 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.06■□□□□ 0.96
CHL1O00533 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CHL1O00533 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.06■□□□□ 0.96
CHL1O00533 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CHL1O00533 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.06■□□□□ 0.96
CHL1O00533 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.06■□□□□ 0.96
CHL1O00533 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.06■□□□□ 0.96
CHL1O00533 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.06■□□□□ 0.96
CHL1O00533 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CHL1O00533 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHL1O00533 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms