Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAI2Q9Y5P3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 AL355306.1-201ENST00000415580 579 ntBASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 ACTG1P14-201ENST00000446382 1122 ntBASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 AC084018.2-201ENST00000613093 2607 ntBASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.73■□□□□ 0.27
RAI2Q9Y5P3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 ELL2P1-201ENST00000413990 1906 ntBASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 AC079328.2-201ENST00000561241 3354 ntBASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 KRT18P34-201ENST00000488218 1270 ntBASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 AC138761.1-201ENST00000584393 385 ntBASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAI2Q9Y5P3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 PCGF3-213ENST00000620529 1899 ntBASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms