Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 HCG4-201ENST00000418983 998 ntBASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 FAM8A3P-201ENST00000427218 844 ntBASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 FAM58CP-201ENST00000435741 640 ntBASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 METTL21AP1-201ENST00000438852 635 ntBASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 AL162727.3-201ENST00000635661 2787 ntBASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPH3AQ9Y2J0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 AC211486.1-202ENST00000416371 468 ntBASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 AC211476.1-201ENST00000503899 468 ntBASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 AC091812.2-201ENST00000619081 385 ntBASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPH3AQ9Y2J0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPH3AQ9Y2J0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RPH3AQ9Y2J0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.21■□□□□ 0.03
RPH3AQ9Y2J0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
RPH3AQ9Y2J0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPH3AQ9Y2J0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPH3AQ9Y2J0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPH3AQ9Y2J0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.21■□□□□ 0.03
RPH3AQ9Y2J0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms