Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLC52A1Q9NWF4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 PCGF3-213ENST00000620529 1899 ntBASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 MFF-223ENST00000524634 647 ntTSL 2 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 AC018665.1-201ENST00000622927 1362 ntBASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SLC52A1Q9NWF4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 AL583810.1-201ENST00000553344 1045 ntBASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC52A1Q9NWF4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 LINC01144-201ENST00000626198 1710 ntBASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 ACTG1P3-201ENST00000431775 1114 ntBASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 ACTBP11-201ENST00000436287 1126 ntBASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 RPL13P2-201ENST00000440687 659 ntBASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 SLC25A47P1-201ENST00000531577 414 ntBASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 AL158212.4-201ENST00000624062 1286 ntBASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLC52A1Q9NWF4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC52A1Q9NWF4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC52A1Q9NWF4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC52A1Q9NWF4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC23.33■■□□□ 1.32
SLC52A1Q9NWF4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC23.33■■□□□ 1.32
SLC52A1Q9NWF4 AC005622.1-201ENST00000636801 1703 ntBASIC23.33■■□□□ 1.32
SLC52A1Q9NWF4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC23.33■■□□□ 1.32
SLC52A1Q9NWF4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC52A1Q9NWF4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC52A1Q9NWF4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC52A1Q9NWF4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 AL162726.2-201ENST00000438986 1017 ntBASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC23.32■■□□□ 1.32
SLC52A1Q9NWF4 LINC01115-203ENST00000606068 577 ntBASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms