Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 AL671710.1-201ENST00000610245 2349 ntBASIC16.72■□□□□ 0.27
VPS11Q9H270 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.72■□□□□ 0.27
VPS11Q9H270 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.72■□□□□ 0.27
VPS11Q9H270 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VPS11Q9H270 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.72■□□□□ 0.27
VPS11Q9H270 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.72■□□□□ 0.27
VPS11Q9H270 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.72■□□□□ 0.27
VPS11Q9H270 AL358472.4-201ENST00000633140 710 ntBASIC16.72■□□□□ 0.27
VPS11Q9H270 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.72■□□□□ 0.27
VPS11Q9H270 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
VPS11Q9H270 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VPS11Q9H270 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS11Q9H270 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.71■□□□□ 0.27
VPS11Q9H270 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.71■□□□□ 0.27
VPS11Q9H270 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 FAM210CP-201ENST00000445714 574 ntBASIC16.71■□□□□ 0.27
VPS11Q9H270 PRYP5-201ENST00000451909 266 ntBASIC16.71■□□□□ 0.27
VPS11Q9H270 KRT16P4-201ENST00000453883 522 ntBASIC16.71■□□□□ 0.27
VPS11Q9H270 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
VPS11Q9H270 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
VPS11Q9H270 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.71■□□□□ 0.27
VPS11Q9H270 AL022326.1-202ENST00000641533 845 ntBASIC16.71■□□□□ 0.27
VPS11Q9H270 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VPS11Q9H270 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
VPS11Q9H270 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
VPS11Q9H270 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VPS11Q9H270 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 AC022532.1-201ENST00000624563 1728 ntBASIC16.7■□□□□ 0.26
VPS11Q9H270 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS11Q9H270 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.7■□□□□ 0.26
VPS11Q9H270 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS11Q9H270 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS11Q9H270 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 AC006449.6-201ENST00000612330 2296 ntBASIC16.7■□□□□ 0.26
VPS11Q9H270 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
VPS11Q9H270 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS11Q9H270 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS11Q9H270 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS11Q9H270 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.7■□□□□ 0.26
VPS11Q9H270 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VPS11Q9H270 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.7■□□□□ 0.26
VPS11Q9H270 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.7■□□□□ 0.26
VPS11Q9H270 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS11Q9H270 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.7■□□□□ 0.26
VPS11Q9H270 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.7■□□□□ 0.26
VPS11Q9H270 NKAPP1-205ENST00000585790 367 ntBASIC16.7■□□□□ 0.26
VPS11Q9H270 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
VPS11Q9H270 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS11Q9H270 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS11Q9H270 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
VPS11Q9H270 NORAD-201ENST00000565493 5339 ntBASIC16.7■□□□□ 0.26
VPS11Q9H270 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VPS11Q9H270 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.7■□□□□ 0.26
VPS11Q9H270 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.7■□□□□ 0.26
VPS11Q9H270 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms