Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 PP12613-201ENST00000424958 2230 ntBASIC9.95□□□□□ -0.82
LIMD2Q9BT23 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC9.95□□□□□ -0.82
LIMD2Q9BT23 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 BANP-204ENST00000393208 2283 ntTSL 2 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 AC026691.1-201ENST00000602502 2017 ntBASIC9.94□□□□□ -0.82
LIMD2Q9BT23 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 RHBDF1P1-201ENST00000427504 1941 ntBASIC9.94□□□□□ -0.82
LIMD2Q9BT23 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 AL135999.2-201ENST00000622438 1686 ntBASIC9.94□□□□□ -0.82
LIMD2Q9BT23 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 AL021920.2-201ENST00000624828 1351 ntBASIC9.94□□□□□ -0.82
LIMD2Q9BT23 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 TLE1-202ENST00000376484 666 ntTSL 3 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 RCN1P2-201ENST00000398357 915 ntBASIC9.94□□□□□ -0.82
LIMD2Q9BT23 NABP1-203ENST00000409510 843 ntTSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 ABCD1P5-201ENST00000445663 754 ntBASIC9.94□□□□□ -0.82
LIMD2Q9BT23 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 MIR3652-201ENST00000579335 131 ntBASIC9.94□□□□□ -0.82
LIMD2Q9BT23 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 AC138894.3-201ENST00000603787 634 ntBASIC9.94□□□□□ -0.82
LIMD2Q9BT23 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 AL139288.1-201ENST00000623748 933 ntBASIC9.94□□□□□ -0.82
LIMD2Q9BT23 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 MYO15B-237ENST00000642007 4893 ntBASIC9.94□□□□□ -0.82
LIMD2Q9BT23 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC9.94□□□□□ -0.82
LIMD2Q9BT23 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
LIMD2Q9BT23 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 AC132938.5-201ENST00000624980 1813 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 PMPCAP1-201ENST00000508114 1576 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms