Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 MCCD1P2-201ENST00000423228 335 ntBASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 AL078644.1-201ENST00000609881 752 ntBASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
PCGF1Q9BSM1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCGF1Q9BSM1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCGF1Q9BSM1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
PCGF1Q9BSM1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PCGF1Q9BSM1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 PDPK2P-202ENST00000562415 1191 ntBASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 AC005829.1-201ENST00000570002 483 ntBASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 AC055717.3-201ENST00000622967 595 ntBASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.95□□□□□ -0.18
PCGF1Q9BSM1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 AC211486.1-202ENST00000416371 468 ntBASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 RHOQP3-201ENST00000437982 621 ntBASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 FAM185BP-201ENST00000443595 716 ntBASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 AC074386.1-202ENST00000463561 864 ntBASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PCGF1Q9BSM1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms